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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1009
total RNA-seq
712
ChIP-seq
244
ATAC-seq
180
single cell RNA-seq
174
DNase-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
21
pCHi-C
16
small RNA-seq
15
Hi-C
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
32
DNA accessibility
Date released
10
April, 2020
8
January, 2021
6
August, 2021
2
February, 2023
2
July, 2019
1
August, 2017
1
August, 2022
1
May, 2022
1
November, 2018
Available data
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
2
fastq
1
bed bed3+
1
txt
Organism
31
Homo sapiens
Biosample type
56
primary cell
32
tissue
Organ
13
pancreas
10
lung
7
kidney
1
brain
1
musculature of body
Project
12
AMP
10
LungMap
10
T1D
Genome assembly (visualization)
5
hg19
Lab
10
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
AMP-T2D consortium
6
Katalin Susztak, Upenn
Audit category:
2
audit script error
month_released!
October, 2019
BIOSAMPLE
ASSAY
32 results
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snATAC-seq
FAIRE-seq
tissue
lung
10
islet of Langerhans
7
1
kidney
6
1
pancreas
4
1
frontal cortex
1
skeletal muscle tissue
1
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