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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
Assay category
134
Transcription
47
DNA binding
42
DNA accessibility
3
3D chromatin structure
2
DNA methylation
Target of assay
31
histone
31
histone modification
17
narrow histone mark
14
broad histone mark
9
control
7
transcription factor
4
RNA binding protein
Date released
22
June, 2019
13
November, 2019
October, 2019
4
December, 2017
4
May, 2021
3
May, 2019
1
March, 2020
Available data
47
bam
38
bed narrowPeak
38
bigWig
20
bigBed narrowPeak
4
fastq
3
tagAlign
Organism
47
Homo sapiens
Biosample type
25
primary cell
15
cell line
7
in vitro differentiated cells
Organ
25
epithelium
15
pancreas
11
connective tissue
8
musculature of body
6
kidney
4
embryo
4
heart
Project
45
AMP
2
T1D
Genome assembly (visualization)
38
GRCh38
38
hg19
Lab
47
AMP-T2D consortium
Audit category:
47
inconsistent ontology term
28
inconsistent control
Audit category:
1
inconsistent control read length
month_released!
October, 2019
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
4
epithelial cell of proximal tubule
3
kidney epithelial cell
3
cell line
EndoC_BH1
15
in vitro differentiated cells
Hepatic endoderm
4
cardiomyocytes
3
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