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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
3
Hi-C
2
DNase-seq
Assay category
3
3D chromatin structure
3
DNA binding
2
DNA accessibility
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
October, 2019
3
November, 2017
2
July, 2019
2
June, 2019
1
March, 2020
Available data
9
bigWig
7
bam
4
bed bed3+
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
3
fastq
2
hdf5
tsv
1
bedpe bed3+
1
hic
Organism
8
Homo sapiens
Biosample type
93
tissue
14
cell line
8
primary cell
Organ
259
epithelium
238
pancreas
24
connective tissue
21
kidney
18
brain
14
vasculature
12
musculature of body
9
heart
8
blood
8
blood vessel
8
bodily fluid
8
liver
5
eye
1
bone element
1
bone marrow
1
vein
Project
8
AMP
Genome assembly (visualization)
7
hg19
4
GRCh38
Lab
8
AMP-T2D consortium
month_released!
October, 2019
files.file_type!
tsv
BIOSAMPLE
ASSAY
8 results
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ChIP-seq
Hi-C
DNase-seq
primary cell
brain microvascular endothelial cell
3
1
1
endothelial cell of hepatic sinusoid
1
endothelial cell of umbilical vein
1
kidney capillary endothelial cell
1
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