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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
4
total RNA-seq
3
DNase-seq
Assay category
5
DNA binding
4
Transcription
3
DNA accessibility
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
8
June, 2019
4
July, 2019
Available data
12
bam
10
bigWig
6
bed narrowPeak
6
bigBed narrowPeak
4
tsv
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
bed bedMethyl
1
bigBed bedMethyl
Organism
12
Homo sapiens
Biosample type
298
tissue
66
cell line
12
primary cell
1
in vitro differentiated cells
Organ
367
epithelium
346
pancreas
38
connective tissue
22
kidney
20
brain
15
vasculature
13
musculature of body
12
heart
12
liver
10
blood vessel
8
blood
8
bodily fluid
4
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
1
vein
Project
12
AMP
Genome assembly (visualization)
10
GRCh38
9
hg19
Lab
12
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
month_released!
October, 2019
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
total RNA-seq
DNase-seq
primary cell
cardiac fibroblast
5
3
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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