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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
6
ATAC-seq
4
Hi-C
3
total RNA-seq
1
WGBS
Assay category
38
DNA accessibility
4
3D chromatin structure
3
Transcription
1
DNA methylation
Date released
October, 2019
32
June, 2019
May, 2019
6
February, 2021
5
July, 2019
3
February, 2020
Available data
39
bam
38
bed narrowPeak
33
bigWig
32
bed bed3+
32
bed broadPeak
32
bigBed broadPeak
32
bigBed narrowPeak
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
46
Homo sapiens
Biosample type
46
tissue
Organ
926
pancreas
784
liver
676
connective tissue
490
adipose tissue
484
epithelium
364
heart
319
kidney
172
brain
159
bone element
139
vasculature
133
blood vessel
110
artery
89
musculature of body
69
blood
69
bodily fluid
46
limb
40
eye
37
embryo
25
spleen
20
lung
18
ureter
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
46
AMP
Genome assembly (visualization)
39
GRCh38
38
hg19
Lab
46
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
October, 2019
May, 2019
files.file_type!
bed bedgraph
BIOSAMPLE
ASSAY
46 results
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DNase-seq
ATAC-seq
Hi-C
total RNA-seq
WGBS
tissue
muscle of arm
17
muscle of leg
13
1
gastrocnemius medialis
4
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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