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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
17
WGBS
Assay category
34
DNA methylation
Date released
21
July, 2019
7
November, 2018
6
August, 2017
Available data
2951
bam
2744
bigWig
1538
bed narrowPeak
1439
tsv
1347
fastq
948
bigBed narrowPeak
346
tagAlign
309
bed broadPeak
272
bigBed broadPeak
259
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
16
hic
15
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
4
hdf5
3
cool
3
tar
1
bedpe
1
vcf
Organism
34
Homo sapiens
Biosample type
25
tissue
8
primary cell
1
cell line
Organ
7
heart
6
pancreas
5
epithelium
4
musculature of body
3
kidney
3
liver
2
adipose tissue
2
brain
2
connective tissue
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
34
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
34
AMP-T2D consortium
Audit category:
inconsistent ontology term
month_released!
October, 2019
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
34 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 3 more…
cell line
HepG2
1
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