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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
15
WGBS
Assay category
34
DNA methylation
Date released
23
July, 2019
7
November, 2018
4
August, 2017
Available data
2700
bam
2498
bigWig
1575
bed narrowPeak
1314
fastq
1183
tsv
963
bigBed narrowPeak
341
tagAlign
310
bed broadPeak
274
bigBed broadPeak
259
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
19
bedpe bed3+
19
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
vcf
Organism
34
Homo sapiens
Biosample type
23
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
34
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
October, 2019
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
34 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
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