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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
Hi-C
Assay category
15
3D chromatin structure
Date released
8
March, 2020
3
October, 2022
October, 2019
1
August, 2021
1
March, 2019
1
March, 2023
1
November, 2019
Available data
2299
bam
2202
bigWig
1336
tsv
1107
bed narrowPeak
786
fastq
610
bigBed narrowPeak
289
tagAlign
254
bed broadPeak
236
bed bed3+
217
bigBed broadPeak
157
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
15
hic
13
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
3
cool
1
bedpe
Organism
15
Homo sapiens
Biosample type
10
tissue
5
primary cell
2
cell line
2
in vitro differentiated cells
Organ
6
pancreas
4
epithelium
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
kidney
1
liver
1
vein
Project
11
AMP
3
HPAP
1
ITG
Genome assembly (visualization)
14
hg19
1
GRCh38
Lab
9
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
3
audit script error
month_released!
October, 2019
BIOSAMPLE
ASSAY
15 results
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Hi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
kidney
1
liver
1
pancreas
1
primary cell
chondrocytes
1
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
See all biosamples
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