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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
2
Hi-C
1
snATAC-seq
Assay category
34
DNA accessibility
2
3D chromatin structure
Date released
33
June, 2019
2
March, 2020
1
May, 2022
Available data
68
bigWig
60
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
36
Homo sapiens
Biosample type
35
tissue
1
primary cell
Organ
79
kidney
36
musculature of body
35
brain
34
pancreas
32
heart
32
limb
27
connective tissue
24
epithelium
18
ureter
15
liver
11
vasculature
9
blood vessel
6
adipose tissue
4
eye
3
embryo
2
artery
1
spleen
1
vein
Project
36
AMP
Genome assembly (visualization)
36
hg19
33
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
36 results
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DNase-seq
Hi-C
snATAC-seq
tissue
muscle of arm
17
muscle of leg
13
psoas muscle
2
forelimb muscle
1
hindlimb muscle
1
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primary cell
skeletal muscle cell
1
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