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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
14
ChIP-seq
2
Hi-C
Assay category
33
DNA accessibility
14
DNA binding
2
3D chromatin structure
Target of assay
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
Date released
41
June, 2019
6
May, 2019
2
March, 2020
Available data
68
bigWig
60
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
49
Homo sapiens
Biosample type
40
tissue
9
primary cell
Organ
360
liver
127
brain
104
kidney
96
heart
91
pancreas
67
epithelium
54
blood
54
bodily fluid
52
vasculature
49
musculature of body
48
blood vessel
38
limb
25
connective tissue
18
ureter
13
spleen
9
adipose tissue
6
eye
5
artery
1
vein
Project
49
AMP
Genome assembly (visualization)
49
hg19
46
GRCh38
Lab
49
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
49 results
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DNase-seq
ChIP-seq
Hi-C
tissue
muscle of leg
13
6
muscle of arm
17
psoas muscle
2
forelimb muscle
1
hindlimb muscle
1
primary cell
skeletal muscle satellite cell
7
skeletal muscle cell
1
1
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