Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
5
total RNA-seq
4
DNase-seq
1
RRBS
Assay category
31
DNA accessibility
5
Transcription
DNA binding
1
DNA methylation
Date released
31
February, 2023
October, 2019
4
June, 2019
1
February, 2020
1
July, 2019
Available data
31
bed narrowPeak
5
tsv
4
bam
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
4
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
37
Homo sapiens
Biosample type
35
tissue
2
primary cell
Organ
722
pancreas
528
connective tissue
417
adipose tissue
384
epithelium
293
kidney
256
heart
237
liver
159
bone element
127
vasculature
124
blood vessel
104
artery
66
brain
57
musculature of body
46
limb
37
eye
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
5
spleen
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
37
AMP
Genome assembly (visualization)
32
hg19
4
GRCh38
Lab
37
AMP-T2D consortium
month_released!
October, 2019
lab.title!
Maike Sander, UCSD
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
37 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
DNase-seq
RRBS
tissue
retina
15
3
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
1
Download