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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
280
ChIP-seq
Assay category
280
DNA binding
Target of assay
204
transcription factor
73
histone
73
histone modification
66
recombinant protein
45
broad histone mark
31
RNA binding protein
28
narrow histone mark
13
chromatin remodeller
2
other context
2
other post-translational modification
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
280
bam
280
bed narrowPeak
280
bigBed narrowPeak
279
bigWig
223
fastq
55
bed broadPeak
54
tagAlign
50
bigBed broadPeak
Organism
280
Homo sapiens
Biosample type
217
cell line
57
tissue
6
primary cell
Organ
217
liver
63
brain
4
epithelium
4
vasculature
2
blood vessel
Project
280
AMP
Genome assembly (visualization)
281
hg19
280
GRCh38
Lab
280
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
17
inconsistent control read length
2
inconsistent control run_type
month_released!
October, 2019
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
280 results
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Clear Filters
ChIP-seq
cell line
HepG2
217
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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