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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
7
ChIP-seq
6
ATAC-seq
3
total RNA-seq
Assay category
38
DNA accessibility
7
DNA binding
3
Transcription
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
July, 2019
3
February, 2020
Available data
45
bam
44
bed narrowPeak
38
bigBed narrowPeak
38
bigWig
32
bed bed3+
32
bed broadPeak
32
bigBed broadPeak
3
tsv
Organism
48
Homo sapiens
Biosample type
48
tissue
Organ
911
pancreas
774
liver
662
connective tissue
478
adipose tissue
471
epithelium
360
heart
313
kidney
182
brain
177
vasculature
172
blood vessel
159
bone element
112
artery
86
musculature of body
69
blood
69
bodily fluid
48
limb
39
eye
37
embryo
25
spleen
20
lung
18
ureter
16
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
48
AMP
Genome assembly (visualization)
44
hg19
43
GRCh38
Lab
48
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
October, 2019
July, 2019
September, 2017
BIOSAMPLE
ASSAY
48 results
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DNase-seq
ChIP-seq
ATAC-seq
total RNA-seq
tissue
muscle of leg
13
7
muscle of arm
17
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
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