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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
44
ATAC-seq
6
ChIP-seq
2
DNase-seq
2
single cell RNA-seq
Assay category
58
Transcription
46
DNA accessibility
6
DNA binding
Target of assay
4
transcription factor
2
control
Date released
66
February, 2021
35
February, 2023
October, 2019
May, 2019
3
July, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
71
bam
61
bigWig
58
tsv
50
bed narrowPeak
6
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
110
Homo sapiens
Biosample type
66
cell line
42
tissue
2
primary cell
Organ
926
pancreas
784
liver
680
connective tissue
490
adipose tissue
484
epithelium
324
heart
319
kidney
172
brain
159
bone element
139
vasculature
133
blood vessel
110
artery
89
musculature of body
69
blood
69
bodily fluid
46
limb
40
eye
37
embryo
25
spleen
20
lung
18
ureter
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
110
AMP
Genome assembly (visualization)
104
GRCh38
69
hg19
Lab
110
AMP-T2D consortium
month_released!
October, 2019
May, 2019
BIOSAMPLE
ASSAY
110 results
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total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
6
tissue
coronary artery
1
36
2
pulmonary artery
2
tibial artery
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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