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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
50
histone
50
histone modification
26
narrow histone mark
25
transcription factor
24
broad histone mark
6
chromatin remodeller
2
RNA binding protein
1
recombinant protein
Date released
32
September, 2018
25
August, 2017
10
November, 2017
4
October, 2017
3
November, 2018
1
December, 2017
Available data
89
fastq
88
bam
86
bigWig
48
bed narrowPeak
15
bigBed narrowPeak
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
75
Homo sapiens
Biosample type
44
primary cell
13
cell line
12
tissue
6
in vitro differentiated cells
Organ
44
pancreas
21
epithelium
13
connective tissue
13
liver
8
adipose tissue
4
brain
1
embryo
Project
75
AMP
Genome assembly (visualization)
72
hg19
65
GRCh38
Lab
75
AMP-T2D consortium
Audit category:
75
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
month_released!
October, 2019
organ_slims!
lung
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
cell line
HepG2
13
tissue
white adipose tissue
8
brain
4
in vitro differentiated cells
adipocyte
5
pancreatic endoderm
1
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