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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ATAC-seq
5
ChIP-seq
2
DNase-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
38
DNA accessibility
5
DNA binding
4
Transcription
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
1
July, 2019
Available data
41
bed narrowPeak
8
bam
6
bigWig
5
bigBed narrowPeak
4
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
47
Homo sapiens
Biosample type
66
cell line
47
tissue
2
primary cell
Organ
545
connective tissue
502
pancreas
487
adipose tissue
355
liver
295
kidney
265
heart
179
brain
158
bone element
107
blood vessel
107
vasculature
82
musculature of body
53
limb
47
artery
35
eye
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
47
AMP
Genome assembly (visualization)
41
GRCh38
6
hg19
Lab
47
AMP-T2D consortium
month_released!
October, 2019
BIOSAMPLE
ASSAY
47 results
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ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
36
5
2
1
pulmonary artery
2
tibial artery
1
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