Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
67
total RNA-seq
39
ATAC-seq
4
DNase-seq
3
ChIP-seq
1
RRBS
1
pCHi-C
Assay category
67
Transcription
43
DNA accessibility
3
DNA binding
1
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
150
February, 2021
39
February, 2023
October, 2019
7
June, 2019
1
February, 2020
1
July, 2019
1
May, 2021
Available data
88
txt
73
bam
64
bigWig
63
tsv
41
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
199
Homo sapiens
Biosample type
193
tissue
6
primary cell
Organ
928
pancreas
784
liver
680
connective tissue
490
adipose tissue
489
epithelium
345
heart
324
kidney
200
brain
189
vasculature
183
blood vessel
159
bone element
115
artery
96
musculature of body
69
blood
69
bodily fluid
53
limb
40
eye
37
embryo
25
spleen
20
lung
18
ureter
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
198
AMP
1
T1D
Genome assembly (visualization)
104
hg19
72
GRCh38
Lab
198
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
199 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
total RNA-seq
ATAC-seq
DNase-seq
ChIP-seq
RRBS
pCHi-C
tissue
bone element
84
bone tissue
58
retina
3
15
3
pigmented layer of retina
2
12
acetabular part of hip bone
1
1
+ See 11 more…
primary cell
retinal pigment epithelial cell
1
3
1
megakaryocyte
1
See all biosamples
Download