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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
474
total RNA-seq
152
ChIP-seq
22
ATAC-seq
9
DNase-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Assay category
9
DNA accessibility
Date released
6
June, 2019
1
August, 2017
1
November, 2018
1
November, 2020
Available data
9
bam
9
bed broadPeak
9
bed narrowPeak
9
bigBed broadPeak
9
bigBed narrowPeak
9
bigWig
8
bed bed3+
2
fastq
Organism
9
Homo sapiens
Biosample type
6
primary cell
2
tissue
1
in vitro differentiated cells
Organ
78
kidney
33
musculature of body
32
brain
32
limb
30
heart
18
ureter
14
epithelium
9
connective tissue
7
pancreas
7
vasculature
6
liver
5
blood vessel
4
eye
2
adipose tissue
2
artery
1
spleen
Project
9
AMP
Genome assembly (visualization)
9
GRCh38
8
hg19
Lab
9
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
9 results
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DNase-seq
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
omental fat pad
2
in vitro differentiated cells
adipocyte
1
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