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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
Assay category
43
DNA binding
Target of assay
341
transcription factor
115
control
110
histone modification
109
histone
82
recombinant protein
66
narrow histone mark
58
RNA binding protein
43
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
19
August, 2017
11
December, 2017
8
November, 2017
3
February, 2018
October, 2019
2
August, 2021
Available data
31
bigWig
30
bam
30
bed narrowPeak
29
fastq
21
bigBed narrowPeak
18
tagAlign
8
bed broadPeak
8
bigBed broadPeak
2
bed bed3+
Organism
43
Homo sapiens
Biosample type
22
tissue
11
in vitro differentiated cells
9
cell line
1
primary cell
Organ
74
pancreas
67
brain
54
heart
44
connective tissue
39
liver
32
epithelium
22
blood vessel
22
vasculature
20
adipose tissue
20
musculature of body
12
kidney
4
embryo
4
limb
4
spleen
Project
43
AMP
Genome assembly (visualization)
31
hg19
29
GRCh38
Lab
42
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
7
inconsistent control read length
month_released!
October, 2019
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
tissue
liver
19
right lobe of liver
3
in vitro differentiated cells
hepatocyte
7
pancreatic endoderm
4
cell line
HepG2
9
primary cell
hepatocyte
1
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