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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
4
Hi-C
3
total RNA-seq
1
WGBS
Assay category
DNA accessibility
7
DNA binding
4
3D chromatin structure
3
Transcription
1
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
October, 2019
7
May, 2019
5
July, 2019
3
February, 2020
Available data
8
bam
7
bigWig
6
bed narrowPeak
6
bigBed narrowPeak
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
15
Homo sapiens
Biosample type
15
tissue
Organ
759
pancreas
756
liver
649
connective tissue
483
adipose tissue
373
epithelium
268
heart
164
brain
164
kidney
147
bone element
137
vasculature
133
blood vessel
69
artery
61
musculature of body
60
blood
60
bodily fluid
37
embryo
23
spleen
15
limb
10
lung
9
eye
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
15
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
15
AMP-T2D consortium
month_released!
October, 2019
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
Hi-C
total RNA-seq
WGBS
tissue
muscle of leg
7
1
gastrocnemius medialis
4
1
tibial artery
1
tibial nerve
1
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