Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
7
ChIP-seq
4
Hi-C
3
total RNA-seq
1
WGBS
Assay category
32
DNA accessibility
7
DNA binding
4
3D chromatin structure
3
Transcription
1
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
October, 2019
32
June, 2019
7
May, 2019
February, 2021
5
July, 2019
3
February, 2020
Available data
40
bam
39
bigWig
38
bed narrowPeak
38
bigBed narrowPeak
32
bed bed3+
32
bed broadPeak
32
bigBed broadPeak
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
47
Homo sapiens
Biosample type
47
tissue
Organ
896
pancreas
781
liver
457
epithelium
316
kidney
279
heart
225
connective tissue
200
brain
123
vasculature
117
blood vessel
104
adipose tissue
96
musculature of body
69
blood
69
bodily fluid
49
artery
47
limb
40
eye
37
embryo
25
spleen
20
lung
18
ureter
9
bone element
8
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
47
AMP
Genome assembly (visualization)
38
GRCh38
38
hg19
Lab
47
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
October, 2019
February, 2021
BIOSAMPLE
ASSAY
47 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
Hi-C
total RNA-seq
WGBS
tissue
muscle of leg
13
7
1
muscle of arm
17
gastrocnemius medialis
4
1
forelimb muscle
1
hindlimb muscle
1
+ See 2 more…
See all biosamples
Download