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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
33
DNase-seq
1
ATAC-seq
1
snATAC-seq
Assay category
39
DNA binding
35
DNA accessibility
9
Transcription
6
3D chromatin structure
6
DNA methylation
Target of assay
33
histone
33
histone modification
20
broad histone mark
13
narrow histone mark
6
control
Date released
43
June, 2019
22
August, 2017
7
May, 2019
1
January, 2018
1
May, 2022
Available data
61
bigWig
60
bed narrowPeak
50
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
1
txt
Organism
74
Homo sapiens
Biosample type
63
tissue
11
primary cell
Organ
575
liver
374
pancreas
221
epithelium
206
heart
191
kidney
183
connective tissue
170
brain
114
vasculature
109
blood vessel
80
adipose tissue
74
musculature of body
69
blood
69
bodily fluid
57
artery
45
limb
34
eye
22
embryo
22
spleen
18
ureter
12
bone element
12
skeleton
10
lung
Project
74
AMP
Genome assembly (visualization)
62
hg19
46
GRCh38
Lab
74
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
1
audit script error
month_released!
October, 2019
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
DNase-seq
ATAC-seq
snATAC-seq
tissue
skeletal muscle tissue
22
1
1
muscle of leg
7
13
muscle of arm
17
forelimb muscle
1
hindlimb muscle
1
primary cell
skeletal muscle satellite cell
8
skeletal muscle cell
2
1
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