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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
4
Hi-C
Assay category
15
DNA binding
4
3D chromatin structure
Target of assay
10
histone
10
histone modification
5
broad histone mark
5
control
5
narrow histone mark
Date released
187
June, 2019
33
August, 2017
15
December, 2017
9
November, 2018
8
October, 2019
5
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
176
bam
157
bigWig
94
fastq
79
bed narrowPeak
65
tsv
52
bigBed narrowPeak
23
bed bedMethyl
23
bigBed bedMethyl
19
bed bed3+
4
hdf5
Organism
19
Homo sapiens
Biosample type
12
in vitro differentiated cells
4
primary cell
3
stem cell
Organ
3
brain
3
embryo
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
Project
19
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
6
inconsistent control read length
month_released!
October, 2022
BIOSAMPLE
ASSAY
19 results
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Clear Filters
ChIP-seq
Hi-C
in vitro differentiated cells
Posterior foregut
3
definitive endodermal cell
3
pancreatic endoderm
3
primitive gut cell
3
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
stem cell
hESC
3
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