Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
3
ChIP-seq
2
Hi-C
Assay category
9
DNA accessibility
3
DNA binding
2
3D chromatin structure
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Date released
5
June, 2019
4
October, 2019
3
December, 2017
2
July, 2019
Available data
216
bam
179
bigWig
143
bed narrowPeak
82
tsv
79
bigBed narrowPeak
30
fastq
14
bed bed3+
13
bed broadPeak
13
bigBed broadPeak
6
tagAlign
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
14
Homo sapiens
Biosample type
6
primary cell
5
tissue
3
in vitro differentiated cells
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
14
AMP
Genome assembly (visualization)
13
hg19
12
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent control read length
month_released!
October, 2022
BIOSAMPLE
ASSAY
14 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
Hi-C
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
in vitro differentiated cells
pancreatic endoderm
3
Download