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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
3
ChIP-seq
Assay category
64
DNA accessibility
3
DNA binding
Target of assay
3
transcription factor
1
RNA binding protein
Date released
64
August, 2021
3
November, 2017
Available data
3075
bam
2868
bigWig
1666
bed narrowPeak
1444
tsv
1101
fastq
966
bigBed narrowPeak
391
tagAlign
300
bed broadPeak
263
bigBed broadPeak
252
bed bed3+
160
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
67
Homo sapiens
Biosample type
64
tissue
3
cell line
Organ
64
kidney
3
liver
1
blood vessel
epithelium
1
vasculature
1
vein
Project
67
AMP
Genome assembly (visualization)
64
GRCh38
3
hg19
Lab
64
Katalin Susztak, Upenn
3
AMP-T2D consortium
month_released!
October, 2022
organ_slims!
epithelium
BIOSAMPLE
ASSAY
67 results
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ATAC-seq
ChIP-seq
tissue
kidney
64
cell line
HepG2
3
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