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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
264
total RNA-seq
106
single cell RNA-seq
Assay category
370
Transcription
182
DNA accessibility
93
DNA binding
3
3D chromatin structure
1
DNA sequencing
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
311
tsv
203
bam
203
bigWig
57
txt
Organism
370
Homo sapiens
Biosample type
299
tissue
47
primary cell
17
cell line
7
in vitro differentiated cells
Organ
152
liver
92
heart
57
kidney
8
embryo
6
blood vessel
6
vasculature
2
artery
1
pancreas
Project
325
AMP
45
T1D
Genome assembly (visualization)
203
GRCh38
203
hg19
Lab
258
AMP-T2D consortium
57
Katalin Susztak, Upenn
45
Kyle Gaulton, UCSD
10
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
month_released!
October, 2022
BIOSAMPLE
ASSAY
370 results
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Clear Filters
total RNA-seq
single cell RNA-seq
tissue
liver
143
kidney
49
8
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
+ See 11 more…
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 22 more…
cell line
HepG2
9
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
7
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