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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ATAC-seq
50
ChIP-seq
15
RRBS
12
WGBS
8
Hi-C
2
FAIRE-seq
2
total RNA-seq
Assay category
108
DNA accessibility
50
DNA binding
27
DNA methylation
8
3D chromatin structure
2
Transcription
Target of assay
27
histone
27
histone modification
27
narrow histone mark
23
control
Date released
406
November, 2017
322
August, 2017
298
October, 2019
226
May, 2021
218
June, 2019
200
May, 2022
196
August, 2021
189
February, 2023
156
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
365
bam
345
bigWig
tsv
50
tagAlign
34
bed narrowPeak
23
bed bedMethyl
23
bigBed bedMethyl
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
195
Homo sapiens
Biosample type
115
primary cell
80
tissue
Organ
53
liver
14
heart
8
epithelium
7
brain
7
vasculature
6
blood vessel
6
musculature of body
5
kidney
5
limb
2
connective tissue
2
pancreas
1
artery
1
eye
1
pericardium
Project
195
AMP
Genome assembly (visualization)
98
hg19
33
GRCh38
Lab
195
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
month_released!
October, 2022
files.file_type!
tsv
BIOSAMPLE
ASSAY
195 results
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Clear Filters
ATAC-seq
ChIP-seq
RRBS
WGBS
Hi-C
FAIRE-seq
total RNA-seq
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 37 more…
tissue
liver
50
heart left ventricle
2
1
4
gastrocnemius medialis
4
aorta
2
heart right ventricle
2
+ See 14 more…
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