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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
ChIP-seq
Assay category
109
DNA binding
Target of assay
339
transcription factor
109
control
106
histone modification
105
histone
82
recombinant protein
63
narrow histone mark
59
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
56
November, 2017
23
May, 2020
13
December, 2017
11
August, 2017
5
August, 2021
1
June, 2019
Available data
102
bam
77
fastq
28
tagAlign
13
bigWig
1
bed bed3+
Organism
109
Homo sapiens
Biosample type
60
cell line
46
tissue
2
primary cell
1
in vitro differentiated cells
Organ
108
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
109
AMP
Genome assembly (visualization)
14
hg19
1
GRCh38
Lab
105
AMP-T2D consortium
4
Bing Ren, UCSD
month_released!
October, 2022
BIOSAMPLE
ASSAY
109 results
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ChIP-seq
cell line
HepG2
60
tissue
liver
43
right lobe of liver
3
primary cell
hepatocyte
1
retinal pigment epithelial cell
1
in vitro differentiated cells
hepatocyte
1
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