Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
Hi-C
1
whole genome sequencing assay
Assay category
1
3D chromatin structure
1
DNA sequencing
Date released
1
August, 2021
1
March, 2019
Available data
3320
bam
3097
bigWig
1771
bed narrowPeak
1574
tsv
1285
fastq
1028
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
7
csv
5
hdf5
4
tar
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
2
Homo sapiens
Biosample type
1
cell line
1
tissue
Organ
1
liver
1
pancreas
Project
2
AMP
Genome assembly (visualization)
1
hg19
Lab
2
Bing Ren, UCSD
month_released!
September, 2018
files.file_type!
cool
BIOSAMPLE
ASSAY
2 results
search-icon
table-tab-icon
Clear Filters
Hi-C
whole genome sequencing assay
cell line
HepG2
1
tissue
islet of Langerhans
1
Download