Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
single cell RNA-seq
3
ChIP-seq
1
FAIRE-seq
Assay category
7
Transcription
3
DNA binding
1
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
6
February, 2021
3
November, 2017
1
November, 2018
1
October, 2019
September, 2018
Available data
3320
bam
3097
bigWig
1771
bed narrowPeak
1574
tsv
1285
fastq
1028
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
7
csv
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
11
Homo sapiens
Biosample type
6
tissue
3
cell line
2
primary cell
Organ
5
kidney
4
liver
1
blood vessel
1
epithelium
1
vasculature
1
vein
Project
11
AMP
Genome assembly (visualization)
4
hg19
Lab
11
AMP-T2D consortium
Audit category:
5
audit script error
month_released!
September, 2018
BIOSAMPLE
ASSAY
11 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ChIP-seq
FAIRE-seq
tissue
kidney
5
liver
1
cell line
HepG2
3
primary cell
endothelial cell of umbilical vein
1
pancreatic cell
1
Download