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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
4
ChIP-seq
1
FAIRE-seq
Assay category
13
DNA accessibility
4
DNA binding
Target of assay
3
transcription factor
1
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
Date released
10
February, 2023
3
November, 2017
2
February, 2021
2
October, 2019
Available data
3320
bam
3097
bigWig
1771
bed narrowPeak
1574
tsv
1285
fastq
1028
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
7
csv
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
17
Homo sapiens
Biosample type
6
tissue
5
in vitro differentiated cells
4
cell line
2
primary cell
Organ
6
connective tissue
4
bone element
4
liver
4
skeleton
2
brain
1
blood vessel
1
epithelium
1
vasculature
1
vein
Project
17
AMP
Genome assembly (visualization)
17
hg19
3
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent replicate
month_released!
September, 2018
BIOSAMPLE
ASSAY
17 results
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Clear Filters
ATAC-seq
ChIP-seq
FAIRE-seq
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
medial globus pallidus
1
+ See 1 more…
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
3
primary cell
endothelial cell of umbilical vein
1
osteoblast
1
See all biosamples
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