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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
5
total RNA-seq
2
ATAC-seq
2
Hi-C
2
WGBS
1
RRBS
Assay category
6
DNA binding
5
Transcription
3
DNA methylation
2
3D chromatin structure
2
DNA accessibility
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
66
February, 2021
50
May, 2019
47
October, 2019
35
February, 2023
12
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
4
March, 2020
3
February, 2020
Available data
16
bigWig
15
bam
6
bed narrowPeak
6
fastq
5
tsv
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
2
hdf5
Organism
18
Homo sapiens
Biosample type
11
primary cell
7
tissue
Organ
325
liver
109
brain
25
heart
19
epithelium
18
connective tissue
18
vasculature
14
blood vessel
12
adipose tissue
11
kidney
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
18
AMP
Genome assembly (visualization)
16
hg19
12
GRCh38
Lab
18
AMP-T2D consortium
month_released!
September, 2018
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
WGBS
RRBS
primary cell
brain microvascular endothelial cell
3
1
choroid plexus epithelial cell
3
1
endothelial cell of coronary artery
1
endothelial cell of hepatic sinusoid
1
smooth muscle cell of the coronary artery
1
tissue
thoracic aorta
2
1
aorta
2
ascending aorta
1
coronary artery
1
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