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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ChIP-seq
Assay category
84
DNA binding
Target of assay
74
histone
74
histone modification
44
broad histone mark
30
narrow histone mark
10
control
Date released
66
August, 2017
11
November, 2017
7
October, 2017
Available data
bam
2947
bigWig
1642
bed narrowPeak
1506
tsv
1282
fastq
949
bigBed narrowPeak
392
tagAlign
309
bed broadPeak
272
bigBed broadPeak
262
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
7
bed bedgraph
7
csv
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
84
Homo sapiens
Biosample type
70
tissue
14
in vitro differentiated cells
Organ
22
connective tissue
20
liver
18
brain
15
musculature of body
9
pancreas
8
adipose tissue
Project
84
AMP
Genome assembly (visualization)
21
hg19
Lab
84
AMP-T2D consortium
Audit category:
1
missing controlled_by
month_released!
September, 2018
organ_slims!
blood vessel
files.file_type!
bam
BIOSAMPLE
ASSAY
84 results
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ChIP-seq
tissue
liver
20
skeletal muscle tissue
15
islet of Langerhans
9
subcutaneous abdominal adipose tissue
8
brain
7
+ See 4 more…
in vitro differentiated cells
adipocyte
14
See all biosamples
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