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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
108
ChIP-seq
105
total RNA-seq
89
ATAC-seq
79
single cell RNA-seq
47
WGBS
19
DNase-seq
10
snATAC-seq
8
Hi-C
6
MeRIP-seq
6
RRBS
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
1
pCHi-C
Assay category
79
Transcription
Date released
33
April, 2018
33
July, 2018
9
April, 2020
3
August, 2018
1
June, 2018
Available data
70
bam
70
bigWig
70
tsv
66
fastq
Organism
79
Homo sapiens
Biosample type
70
primary cell
9
tissue
Organ
93
heart
74
pancreas
70
epithelium
64
kidney
9
lung
6
blood vessel
6
vasculature
4
connective tissue
3
brain
2
artery
1
liver
1
musculature of body
Project
70
AMP
9
LungMap
Genome assembly (visualization)
70
GRCh38
70
hg19
Lab
70
AMP-T2D consortium
9
Xin Sun, UCSD
Audit category:
1
inconsistent ontology term
month_released!
September, 2018
BIOSAMPLE
ASSAY
79 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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tissue
lung
9
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