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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
377
total RNA-seq
186
ChIP-seq
138
ATAC-seq
74
single cell RNA-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
8
DNase-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
377
Transcription
Date released
120
July, 2018
89
August, 2017
42
February, 2023
41
May, 2021
26
February, 2021
September, 2018
20
November, 2019
16
September, 2020
6
April, 2018
6
May, 2022
5
March, 2020
2
July, 2019
2
October, 2018
1
August, 2021
1
February, 2020
Available data
310
bam
306
tsv
304
bigWig
158
fastq
6
txt
Organism
377
Homo sapiens
Biosample type
289
tissue
55
primary cell
33
cell line
Organ
474
connective tissue
398
adipose tissue
377
pancreas
189
liver
105
epithelium
72
heart
62
bone element
61
blood vessel
61
vasculature
60
kidney
56
artery
19
eye
17
brain
14
embryo
7
limb
6
musculature of body
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
315
AMP
53
HPAP
9
T1D
Genome assembly (visualization)
304
GRCh38
304
hg19
Lab
311
AMP-T2D consortium
53
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
33
inconsistent ontology term
month_released!
September, 2018
BIOSAMPLE
ASSAY
377 results
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Clear Filters
total RNA-seq
tissue
islet of Langerhans
284
body of pancreas
3
pancreas
2
primary cell
pancreatic alpha cell
42
pancreatic beta cell
11
pancreatic acinar cell
2
cell line
EndoC_BH1
33
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