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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
Assay category
93
DNA binding
Target of assay
954
histone modification
953
histone
489
transcription factor
483
narrow histone mark
469
broad histone mark
343
control
108
RNA binding protein
88
recombinant protein
23
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
67
November, 2017
19
November, 2018
7
October, 2019
Available data
93
bam
92
bed narrowPeak
92
bigWig
86
fastq
85
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
93
Homo sapiens
Biosample type
90
cell line
3
tissue
Organ
83
liver
7
kidney
3
spleen
Project
93
AMP
Genome assembly (visualization)
92
GRCh38
89
hg19
Lab
93
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
month_released!
September, 2018
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
93 results
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ChIP-seq
cell line
HepG2
83
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
tissue
spleen
3
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