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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
Assay category
49
DNA binding
Target of assay
49
transcription factor
30
histone
30
histone modification
16
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
47
November, 2017
2
August, 2017
Available data
496
bigWig
485
bam
469
bed narrowPeak
454
fastq
405
bigBed narrowPeak
49
bed broadPeak
49
bigBed broadPeak
19
bed bed3+
9
tagAlign
3
tar
Organism
49
Homo sapiens
Biosample type
44
cell line
5
primary cell
Organ
44
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
49
AMP
Genome assembly (visualization)
49
hg19
36
GRCh38
Lab
49
AMP-T2D consortium
Audit category:
2
inconsistent control read length
month_released!
September, 2020
audit.ERROR.category!
inconsistent replicate
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
cell line
HepG2
44
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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