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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
8
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
8
DNA accessibility
Date released
150
February, 2021
4
February, 2023
1
May, 2021
Available data
88
txt
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
bed bed3
Organism
155
Homo sapiens
Biosample type
154
tissue
1
primary cell
Organ
776
pancreas
687
liver
600
connective tissue
459
adipose tissue
412
epithelium
324
kidney
296
heart
165
vasculature
160
blood vessel
155
bone element
121
artery
98
brain
73
limb
68
blood
68
bodily fluid
63
musculature of body
58
eye
25
embryo
20
lung
19
nerve
19
spleen
18
ureter
12
skeleton
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
154
AMP
1
T1D
Genome assembly (visualization)
66
GRCh38
66
hg19
Lab
154
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
month_released!
September, 2020
files.file_type!
bed bed3
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
155 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
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primary cell
megakaryocyte
1
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