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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
16
WGBS
1
ChIP-seq
Assay category
35
DNA methylation
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
22
July, 2019
7
November, 2018
6
August, 2017
1
October, 2019
Available data
3212
bam
3016
bigWig
1688
bed narrowPeak
1532
tsv
1314
fastq
963
bigBed narrowPeak
392
tagAlign
309
bed broadPeak
272
bigBed broadPeak
262
bed bed3+
161
txt
134
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
36
Homo sapiens
Biosample type
25
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
brain
3
connective tissue
3
liver
2
adipose tissue
2
spleen
2
vasculature
blood vessel
1
eye
1
limb
1
pericardium
Project
36
AMP
Genome assembly (visualization)
20
hg19
17
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
September, 2020
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
36 results
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Clear Filters
RRBS
WGBS
ChIP-seq
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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