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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
50
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
100
DNA accessibility
50
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
23
control
Date released
683
February, 2021
341
May, 2020
338
May, 2021
315
August, 2021
233
October, 2019
198
August, 2017
149
February, 2023
100
July, 2019
96
May, 2022
94
November, 2017
50
March, 2020
47
September, 2023
44
December, 2017
40
May, 2024
September, 2020
39
February, 2018
24
February, 2020
22
May, 2019
19
April, 2020
18
October, 2018
16
April, 2019
15
May, 2023
12
October, 2017
11
July, 2018
11
November, 2018
10
April, 2018
10
December, 2019
9
January, 2019
8
January, 2018
8
January, 2021
8
June, 2019
6
November, 2019
5
December, 2018
5
March, 2023
5
November, 2020
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
283
bam
260
bigWig
189
tsv
50
tagAlign
27
bed narrowPeak
Organism
341
Homo sapiens
Biosample type
193
tissue
147
primary cell
1
cell line
Organ
194
liver
Project
296
AMP
45
T1D
Genome assembly (visualization)
260
hg19
207
GRCh38
Lab
296
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
month_released!
September, 2020
organ_slims!
pancreas
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
341 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
50
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 24 more…
cell line
HepG2
1
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