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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
431
ChIP-seq
5
total RNA-seq
Assay category
431
DNA binding
5
Transcription
Target of assay
258
transcription factor
95
histone
95
histone modification
75
control
66
recombinant protein
54
broad histone mark
43
RNA binding protein
41
narrow histone mark
21
chromatin remodeller
2
other context
2
other post-translational modification
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
May, 2024
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
422
bam
360
bigWig
354
fastq
334
bed narrowPeak
333
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
5
tsv
3
tar
Organism
436
Homo sapiens
Biosample type
338
cell line
89
tissue
9
primary cell
Organ
320
liver
91
brain
18
blood
18
bodily fluid
7
spleen
6
epithelium
6
vasculature
3
blood vessel
Project
436
AMP
Genome assembly (visualization)
307
hg19
306
GRCh38
Lab
436
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
September, 2020
organ_slims!
pancreas
BIOSAMPLE
ASSAY
436 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
315
5
GM12878
18
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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