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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
WGBS
46
ATAC-seq
37
total RNA-seq
3
Hi-C
Assay category
47
DNA methylation
46
DNA accessibility
37
Transcription
3
3D chromatin structure
Date released
80
May, 2022
37
February, 2023
September, 2020
7
August, 2020
6
February, 2021
3
October, 2022
Available data
80
zippedFastqFolder
50
fastq
7
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
133
Homo sapiens
Biosample type
133
primary cell
Organ
133
epithelium
133
pancreas
Project
133
HPAP
Genome assembly (visualization)
7
GRCh38
3
hg19
Lab
725
AMP-T2D consortium
133
Klaus Kaestner, Upenn
51
Kyle Gaulton, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
3
audit script error
month_released!
September, 2020
BIOSAMPLE
ASSAY
133 results
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WGBS
ATAC-seq
total RNA-seq
Hi-C
primary cell
pancreatic alpha cell
31
27
27
1
pancreatic beta cell
16
15
10
1
pancreatic acinar cell
4
1
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