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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
17
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
January, 2019
6
November, 2018
1
October, 2017
Available data
21
bam
21
fastq
13
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
tsv
Organism
21
Homo sapiens
Biosample type
21
tissue
Organ
615
liver
510
pancreas
349
epithelium
330
kidney
260
brain
225
heart
206
connective tissue
168
vasculature
162
blood vessel
115
limb
101
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
56
eye
38
nerve
23
embryo
22
vein
21
spleen
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
21
AMP
Genome assembly (visualization)
13
GRCh38
11
hg19
Lab
21
AMP-T2D consortium
month_released!
September, 2020
files.file_type!
tsv
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
17
2
1
1
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