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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
309
transcription factor
88
recombinant protein
58
RNA binding protein
32
histone
32
histone modification
28
chromatin remodeller
16
broad histone mark
16
narrow histone mark
2
other context
2
other post-translational modification
Date released
13
November, 2017
7
November, 2018
6
January, 2019
2
December, 2018
Available data
28
bam
28
bed narrowPeak
28
bigBed narrowPeak
28
bigWig
28
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
28
Homo sapiens
Biosample type
28
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
18
liver
10
blood
10
bodily fluid
Project
28
AMP
Genome assembly (visualization)
30
hg19
28
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
4
missing controlled_by
Audit category:
10
inconsistent control read length
6
inconsistent control run_type
month_released!
September, 2020
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
cell line
HepG2
18
GM12878
10
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