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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
total RNA-seq
43
single cell RNA-seq
Assay category
231
Transcription
165
DNA binding
34
DNA accessibility
1
DNA methylation
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
224
bigWig
222
bam
222
tsv
44
fastq
2
bed bed3+
Organism
231
Homo sapiens
Biosample type
98
primary cell
84
in vitro differentiated cells
45
tissue
4
cell line
Organ
80
pancreas
39
epithelium
3
connective tissue
3
heart
2
embryo
Project
180
AMP
51
T1D
Genome assembly (visualization)
224
hg19
222
GRCh38
Lab
172
AMP-T2D consortium
59
Kyle Gaulton, UCSD
Audit category:
69
inconsistent ontology term
BIOSAMPLE
ASSAY
231 results
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total RNA-seq
single cell RNA-seq
primary cell
monocyte
52
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
+ See 8 more…
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
embryonic stem cell
5
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
tissue
islet of Langerhans
42
cardiac atrium
1
cardiac ventricle
1
pancreas
1
cell line
EndoC_BH1
4
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