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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
single cell RNA-seq
34
ChIP-seq
total RNA-seq
1
Hi-C
Assay category
43
Transcription
34
DNA binding
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
77
bam
73
bigWig
73
fastq
43
tsv
30
bed narrowPeak
30
bigBed narrowPeak
Organism
78
Homo sapiens
Biosample type
43
primary cell
28
cell line
7
tissue
Organ
33
epithelium
33
pancreas
27
blood
27
bodily fluid
7
spleen
2
connective tissue
1
liver
Project
78
AMP
Genome assembly (visualization)
73
GRCh38
73
hg19
Lab
78
AMP-T2D consortium
Audit category:
1
inconsistent control
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
78 results
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single cell RNA-seq
ChIP-seq
Hi-C
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
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cell line
GM12878
27
HepG2
1
tissue
spleen
7
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