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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
194
total RNA-seq
45
ATAC-seq
43
single cell RNA-seq
27
ChIP-seq
Assay category
237
Transcription
45
DNA accessibility
27
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
332
bam
309
bigWig
238
tsv
50
tagAlign
44
fastq
27
bed narrowPeak
Organism
309
Homo sapiens
Biosample type
176
tissue
133
primary cell
Organ
170
liver
39
pancreas
33
epithelium
2
connective tissue
Project
264
AMP
45
T1D
Genome assembly (visualization)
309
hg19
256
GRCh38
Lab
264
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
309 results
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Clear Filters
total RNA-seq
ATAC-seq
single cell RNA-seq
ChIP-seq
tissue
liver
143
27
islet of Langerhans
6
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
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