Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
total RNA-seq
46
single cell RNA-seq
18
small RNA-seq
15
RRBS
12
WGBS
8
Hi-C
Assay category
114
Transcription
27
DNA methylation
8
3D chromatin structure
DNA accessibility
Target of assay
3
control
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
126
bigWig
123
bam
114
tsv
44
fastq
23
bed bedMethyl
23
bigBed bedMethyl
4
bed bed3+
4
hdf5
Organism
149
Homo sapiens
Biosample type
75
tissue
74
primary cell
Organ
46
epithelium
45
pancreas
21
heart
20
connective tissue
16
brain
12
adipose tissue
10
kidney
10
liver
10
musculature of body
10
vasculature
9
blood vessel
5
limb
2
artery
2
pericardium
1
eye
Project
149
AMP
Genome assembly (visualization)
133
hg19
122
GRCh38
Lab
149
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
149 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
RRBS
WGBS
Hi-C
tissue
heart left ventricle
2
1
4
islet of Langerhans
6
1
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
+ See 24 more…
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
+ See 30 more…
See all biosamples
Download