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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
43
single cell RNA-seq
10
MeRIP-seq
10
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
120
DNA binding
53
Transcription
2
DNA accessibility
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
28
control
5
RNA binding protein
5
nucleotide modification
5
transcription factor
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
175
bam
151
bigWig
99
bed narrowPeak
98
bigBed narrowPeak
53
tsv
44
fastq
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
185
Homo sapiens
Biosample type
125
tissue
54
primary cell
6
cell line
Organ
51
pancreas
50
blood vessel
50
vasculature
44
epithelium
28
brain
21
heart
8
connective tissue
7
limb
7
musculature of body
5
artery
5
kidney
Project
185
AMP
Genome assembly (visualization)
152
hg19
151
GRCh38
Lab
175
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
9
inconsistent ontology term
BIOSAMPLE
ASSAY
185 results
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Clear Filters
ChIP-seq
single cell RNA-seq
MeRIP-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 7 more…
primary cell
pancreatic delta cell
7
osteoblast
4
1
1
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
+ See 7 more…
cell line
EndoC_BH1
6
See all biosamples
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