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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
single cell RNA-seq
22
total RNA-seq
Assay category
65
Transcription
Date released
559
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
123
August, 2021
89
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
299
bam
256
bigWig
189
bed narrowPeak
70
bigBed narrowPeak
65
tsv
49
tagAlign
44
fastq
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
4
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
65
Homo sapiens
Biosample type
45
primary cell
14
tissue
4
cell line
2
in vitro differentiated cells
Organ
39
pancreas
36
epithelium
6
kidney
4
limb
4
nerve
2
connective tissue
2
heart
1
brain
1
liver
Project
65
AMP
Genome assembly (visualization)
65
GRCh38
65
hg19
Lab
65
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
65 results
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single cell RNA-seq
total RNA-seq
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
+ See 7 more…
tissue
islet of Langerhans
6
tibial nerve
4
heart
2
brain
1
liver
1
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
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